hg38/GRCh38 Genome Build

The reference files were downloaded here. This build include an additional index file that is required to flag alternate contigs as described here.

FASTA

• Homo_sapiens_assembly38.fasta

• Homo_sapiens_assembly38.fasta.fai

• Homo_sapiens_assembly38.dict

Burrows-Wheeler transformed

• Homo_sapiens_assembly38.fasta.64.bwt

• Homo_sapiens_assembly38.fasta.64.ann

• Homo_sapiens_assembly38.fasta.64.amb

• Homo_sapiens_assembly38.fasta.64.pac

• Homo_sapiens_assembly38.fasta.64.sa

Alternate contigs

• Homo_sapiens_assembly38.fasta.64.alt